Resource links

 

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Resources

Here you'll find many resources to compliment our class. Most of what you'll find here are links to websites that can help you find more information.

To jump down the page, click on a subject

Bitter taste and receptor links

PCR

Replication

Bradford Assays

Spectrophotometers

PowerPoint suggestions and ideas

Genetically Modified Organisms

BioFuels

Alu

 

Cheese and soda links

buttermilk info

Fankhauser's Cheese Page

Fankhauser making root beer at home

Fankhauser's Rennet page

milk ferments

CA milk board cheese factoids

Midvalleyvu Family Farms- buttermilk

Methylene blue staining

White Labs pictures of yeast

What is yeast?

Gram stains

Photos of how to do a gram stain

Gram stain explained with video

Animation of gram stains and how they work

Dairy Bacteria

Fermented Dairy Products

Types of Cheeses and Organisms used in Ripening

Even though it is not a peer-reviewed site, this one seems straightforward about how to make buttermilk

Kitchen Cheese

NY Times article on making cheese

Whole Foods Market info about cheese

 

Bacterial cells

Cells Alive

Encycolpedia Brititanica Bacterial Cells

Online Textbook of Bacteriology

Streptococcus lactis

 

Yeast cells

about Baker's yeast life cycle

What is yeast?

Baker's yeast cells

Yeast Cell Architecture and Function (pdf)-

Horst Feldmann

Adolf-Butenandt-Institute

University of Munich

2005

Yeast molecular biology

Fermentation

Lactic acid fermentation

making Tempeh

foods made by fermentation

An explanation

From "How Stuff Works?"

article about fermented foods (pdf)

Notes from a class about fermentation in the food industry (pdf)

Rennett

a cheesemaking company's explanation of rennet

Vegetarian Society's point of view on rennett

Trader Joe's list of cheeses and rennet

from "How Stuff Works?"

 

 

 

 

Interesting websites

 

Science Now

Science Now is a PBS show that does short segments on really cool science things. These links go to some of the pages that cover things that may be useful to our class.

1918 Flu

Anthrax Investigation

Capturing Carbon

Epigenetics

First Primates

Fuel Cells

Killer Microbe

Lab Meat

Marathon Mouse

Pandemic Flu

Personal DNA Testing

Profile: Maydianne Andrade- studies spider sex

Profile: Bonnie Bassler- bacteria talk

Profile: Sangeeta Bhatia- creates tiny livers on computer chips

Profile: Judah Folkman- cancer growth

Profile: Naomi Halaas- nanobiotechnology

Profile: Pardis Sabeti- evolution of the human genome

RNAi

Science of Picky Eaters

Stem Cells (2005)

Stem Cells Breakthrough (2008)

Stem Cells Update (2006)

 

Current Science Events/ Current Science News

From Science Now

From DNALC

Science Daily

Science News

From MSNBC

From Scientific American

Science magazine, AAAS

NSTA WebNews Digest

CSTA current news

Nature magazine

 

Online Resources for Peer Reviewed Journal Articles

PLOS biology

PLOS genetics

PLOS neglected tropical diseases

PLOS medicine

PLOS computational biology

PLOS pathogens

PLoS Currents: Influenza

Open - JGate- if you get an article from here, make sure you only search peer reviewed journals

Websites with information about how to do citations and/or online research

UC Berkeley

West Texas A&M University

Internet Public Library

Purdue

National Library of Medicine

 

How to properly use a lab notebook- I did not write any of these. The links are here so you can get an idea of what other scientists, universities, or companies expect their scientists to do.

Truman Chemistry Lab

The Book Factory Lab Notebook Guidelines

A Physics Example

A Lab Notebook Guide (pdf)

Rice University- a guide for chemistry notebooks

University of Utah- Electrical and Chemical Engineering Department

A Condensed Version of Lab Notebook Rules (doc)

 

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Visualizing molecules

VMD- a powerful program that lets you "play" with images of molecules

PDB- protein data bank

Link to Molecule of the Month page

 

Genetically Modified Organisms

GMO Compass- lists what is going on in many countries with various GMO crops

An extensive list of links related to genetically modified organisms and related biology topics

Africa rice center

The Council for Biotech Information- Why Biotech?

Biofuels

CropLife- biofuel basics

NREL- National Renewable Energy Laboratory

article about using microbes in termite guts to gather enzymes

Ethanol producer magazine

Renewable energy world

Bradford Assays

An explanation

Manual on protein assays

MATC protocol for Bradford Assay

Background information for Bradford Assays

pdf for a Spectroscopy lab doing the Bradford Assay

Example lab 2

If you really want to make your brain squish, try understanding this explnation

pdf from a company that makes Bradford Assay kits (Promega)

pdf of a Bradford Assay done by scientists at USDA

This site explains which amino acids Bradford reagent likes

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Spectrophtometers

 

Voice Thread- online discussions

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Powerpoint suggestions and tips

 

Technical Writing

How to write a research report

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Replication

Replication animations at DNA interactive

Animation with written explanations

Animations made by folks at Harvard

Animation that labels the major players: helicase, DNA pol III, DNA pol I, RNA primers

Another Animation- you control how fast it goes by clicking to advance

Lagging Strand animation- emphasizes the formation of Okazaki fragments

A flash animation where you can step through the process to see how each replication fork has a leading and a lagging strand

McGraw-Hill narrated

 

PCR animations

dnalc animation 1

Sumanas Inc

list of links at the Utah genetics website

PCR and real-time PCR

narrated animation

simple animation

from Nobelprize.org

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Bitter taste and receptor links

Information at the Utah's Genetic Science Learning Center

 

Restriction Enzymes

The history of Restriction Enzymes

 

Alu

DNALC pages

 

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